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Write class file pipeline for EnrichmentMap

Source: R/enrichmentmap_functions.R
write_cls_pip.Rd

This function writes a class file for EnrichmentMap visualization.

Usage

write_cls_pip(dds, group_by, group_dir = group_dir, save_dir = getwd())

Arguments

dds

DESeq2 object

group_by

Group by column name

group_dir

Parent directory containing comparison subdirectories. Default is current working directory

save_dir

Directory where the formatted files will be saved. Default is current working directory