Read Differential Expression Results

This function reads differential expression results from multiple comparison directories and optionally merges them into a single data frame.

Usage

read_diffexp(group_dir = getwd(), merge = T)

Arguments

group_dir

Parent directory containing comparison subdirectories. Default is current working directory

merge

Logical. If TRUE, returns a single merged data frame. If FALSE, returns a list of data frames

Value

Either a merged data frame or a list of data frames containing differential expression results

Examples

if (FALSE) { # \dontrun{
# Read and merge all results
merged_results <- read_diffexp(group_dir = "results", merge = TRUE)

# Read results as a list
results_list <- read_diffexp(group_dir = "results", merge = FALSE)
} # }